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Data from: DNA barcodes from century-old type specimens using next generation sequencing
负责人:
关键词:
DNA Barcoding;type specimens;NGS;degraded DNA
摘要:
type specimens are often more than a century old and have experienced conditions unfavorable for DNA preservation, success in sequence recovery has been unce
Data from: Not all sequence tags are created equal: designing and validating sequence identification tags robust to indels
负责人:
关键词:
Hamming distance;edit metric;sequence tags;Levenshtein distance;massively parallel sequencing
摘要:
Ligating adapters with unique synthetic oligonucleotide sequences (sequence tags) onto individual DNA samples before massively parallel sequencing
Data from: Identification of North Sea molluscs with DNA barcoding
负责人:
关键词:
DNA Barcoding;Molluscs;Specimens identification;North Sea
摘要:
Sequence-based specimen identification, known as DNA barcoding, is a common method complementing traditional morphology-based taxonomic assignments
Data from: De novo sequencing and variant calling with nanopores using PoreSeq
负责人:
关键词:
nanopore sequencing;variant calling;error correction
摘要:
transits through the nanopore and finds the sequence that best explains multiple reads of the same region. PoreSeq increases nanopore sequencing read
Data from: Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count?
负责人:
关键词:
Captive Populations;DNA Barcoding;Diet Analysis;Mammals
摘要:
A goal of many environmental DNA barcoding studies is to infer quantitative information about relative abundances of different taxa based on sequence
Data from: Explaining large mitochondrial sequence differences within a population sample
负责人:
关键词:
Constraining selection;Hemideina crassidens;genetic drift;DNA Barcoding;mtDNA divergence;Recent;population size
摘要:
Mitochondrial DNA sequence is frequently used to infer species' boundaries, as divergence is relatively rapid when populations are reproductively
Data from: How to optimize the precision of allele and haplotype frequency estimates using pooled-sequencing data
负责人:
关键词:
Medicago truncatula;Allele frequency estimation;Experimental evolution;coverage depth;Fitness;population genomics;contemporary;haplotype frequency estimation;Holocene
摘要:
to the DNA pool and the mean and variance in sequencing depth both can affect the standard error of allele frequency estimates. To our knowledge, no study
Data from: Estimation of a killer whale (Orcinus orca) population’s diet using sequencing analysis of DNA from feces
负责人:
关键词:
killer whale diet DNA sequence 16s ribosomal RNA
摘要:
individual sequences were aligned to a custom sequence database containing 19 potential fish prey species and the most likely species of each fecal-derived

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