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Data from: Validating the power of mitochondrial metagenomics for community ecology and phylogenetics of complex assemblages
负责人:
关键词:
Diversity assessment;beta diversity;leaf beetle;Chrysomelidae;Mitometagenomics;biodiversity monitoring;Coleoptera;phylobeta;2010;species inventory;genome skimming
摘要:
bioinformatics assembly of mitochondrial genomes. Here, we tested the power of mitochondrial metagenomics by conducting Illumina sequencing on mixtures of >2600
Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
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关键词:
NGS RNA-Seq 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
摘要:
s not been assessed. Here, we compared two NGS approaches, RNA-Sequencing (RNA-Seq) and 16S-metagenomics, assessing their ability to survey neglected zoonotic bacteria
Data from: Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms
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关键词:
meta3C;Bacillus subtilis;metagenomics;Vibrio cholerae;Escherichia coli;meta HiC;genome assembly
摘要:
cribed can be generalized to other taxa remains unknown. Using controlled mixes of bacterial and yeast species, we developed meta3C, a metagenomic
Data from: Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States
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关键词:
Verrucomicrobia;metagenomics;Microbiology;bacteria;soil;Holocene
摘要:
spatial patterns were associated with strong shifts in carbon dynamics. We show that metagenomic approaches can be used to reconstruct below-ground biogeochemic
Data from: Microbial life in a fjord: metagenomic analysis of a microbial mat in Chilean Patagonia
负责人:
关键词:
metagenomics;microbial mats
摘要:
The current study describes the taxonomic and functional composition of metagenomic sequences obtained from a filamentous microbial mat isolated from
Data from: Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with
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关键词:
摘要:
and metagenomics technology are applied to discover new biomarkers from plasma and urine of 59 CHD patients and 43 healthy controls and trace their origin
Data from: Using metagenomics to show the efficacy of forest restoration in the New Jersey Pine Barrens
负责人:
关键词:
wetlands;pine barrens;metagenomics;ITS;eDNA;COI;restoration;16S
摘要:
4-year old AWC stands—the latter two stands being restored from long-term cranberry bogs. A metagenomic analysis of eDNA extracted from these soils sh
Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
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关键词:
shotgun metagenomics soil microbial ecology 16S rRNA gene sequencing biogeography
摘要:
pool of living biomass in terrestrial ecosystems. We used metagenomic sequencing to compare the composition and functional attributes of 16
Data from: Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus
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关键词:
Prochlorococcus sp.;Evolution;microbial ecology;biodiversity;Environmental microbiology
摘要:
Extensive genomic diversity within coexisting members of a microbial species has been revealed through selected cultured isolates and metagenomic
Data from: The impact of tropical forest logging and oil palm agriculture on the soil microbiome
负责人:
关键词:
Environmental DNA;metagenomics;bacteria;Agriculture;Community Ecology
摘要:
microbiome to these land-use changes are poorly understood. Using 16S rRNA gene and shotgun metagenomic sequencing, we compared composition

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