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Data from: Population genetic inferences using immune gene SNPs mirror patterns inferred by microsatellites
负责人:
关键词:
microsatellites;sequence capture;Target Enrichment;Next-generation sequencing;Next Generation Sequencing;population genomics;immunogenetics;Gopherus polyphemus
DOI:
doi:10.5061/dryad.40c7c
摘要:
) to two microsatellite data sets, a full data set of 101 tortoises and a partial data set of 16 tortoises previously genotyped at 10 microsatellites
Data from: The effects of read length, quality and quantity on microsatellite discovery and primer development: from Illumina to PacBio
负责人:
关键词:
microsatellites;Triplaris cumingiana;circular consensus sequencing;Alchornea costaricensis;quality control;error trimming simulation;Cecropia insignis;read length simulation;Populus trichocarpa;sequencing error simulation
DOI:
doi:10.5061/dryad.r20t0
摘要:
l to microsatellite marker validation in three plant species using PacBio circular consensus sequencing (CCS). We then evaluate the performance of PacBio CCS in comparison
Data from: De novo discovery and multiplexed amplification of microsatellite markers for black alder (Alnus glutinosa) and related species using SSR
负责人:
关键词:
high throughput genotyping;Next-generation sequencing;short sequence repeats;Alnus incana;Alnus cordata;common alder;Alnus glutinosa;454 GS-FLX Titanium
DOI:
doi:10.5061/dryad.gg0jm
摘要:
equencing of a microsatellite-enriched library to develop, for the first time, microsatellite markers for Alnus glutinosa, a keystone tree species of European riparian woodland
Data from: Multilocus microsatellite markers for molecular typing of Candida tropicalis isolates
负责人:
关键词:
2 years;phylogenetic tree;Candida trpicalis
DOI:
doi:10.5061/dryad.8497b
摘要:
d to be sequenced and analyzed in order to fully show the potential of these newly developed microsatellite markers.
Data from: Microsatellite analyses across three diverse vertebrate transcriptomes (Acipenser fulvescens, Ambystoma tigrinum, and Dipodomys
负责人:
关键词:
Acipenser fulvescens;repeat motif;Dipodomys spectabilis;454 pyrosequencing;genomics;Ambystoma tigrinum;coding region
DOI:
doi:10.5061/dryad.49s43
摘要:
Historically, many population genetics studies have utilized microsatellite markers sampled at random from the genome and presumed to be selectively
Data from: SNPs selected by information content outperform randomly selected microsatellite loci for delineating genetic identific
负责人:
关键词:
microsatellites;honeybee conservation;SNPs;Apis mellifera mellifera;introgression;Apis mellifera ligustica;dark European honeybee;Apis mellifera carnica
DOI:
doi:10.5061/dryad.5vp20
摘要:
mean accuracy was relatively high across datasets (>91%), microsatellites were the least accurate and the top-ranked informative 144 SNPs were the mos
Data from: High-throughput microsatellite genotyping in ecology: improved accuracy, efficiency, standardization and success with low-quantity
负责人:
关键词:
faecal DNA;Ursus arctos;individual identification;parentage analysis;high-throughput sequencing;short tandem repeat (STR)
DOI:
doi:10.5061/dryad.18tg7
摘要:
by genotyping brown bear samples amplified with a multiplex PCR of 13 new microsatellite markers and a sex marker. HTS of microsatellites provided accurate
Data from: Characterization of new microsatellite loci isolated from Santiria trimera (Burseraceae)
负责人:
关键词:
Santiria trimera;genetic diversity;species delimitation;microsatellite markers;phylogeography
DOI:
doi:10.5061/dryad.dp380n8s
摘要:
microsatellite markers were isolated and characterized. METHODS AND RESULTS: Seven polymorphic loci were isolated using a pyrosequencing-based protocol. The seven loci wer
Data from: Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation
负责人:
关键词:
microsatellites;genetic diversity;SSR;conservation units;SNPs;population genomics;Expected heterozygosity;Arabidopsis halleri;Pool-Seq;whole-genome re-sequencing
DOI:
doi:10.5061/dryad.11jp5
摘要:
Background: Microsatellite markers are widely used for estimating genetic diversity within and differentiation among populations. However, it ha

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