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科学数据
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Data from: Nucleotide polymorphism and copy number variant detection using exome capture and next generation sequencing in the polyploid grass
- 负责人：
- 关键词：
- Switchgrass exome capture
- 摘要：
- in linking genotype to phenotype, we designed an exome capture probe set based on transcript assemblies that represent ~50 Mb of annotated switchgrass exome
Data from: HyRAD-X, a versatile method combining exome capture and RAD sequencing to extract genomic information from ancient DNA
- 负责人：
- 摘要：
- . Here, we present a major update to those methods, namely Hybridization capture from RAD-derived probes obtained from a reduced eXome template (hyRAD
Data from: Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce
- 负责人：
- 摘要：
- and genomic selection approaches are being developed. Targeted sequencing was achieved after capturing P. mariana exome with probes designed from the sequence
Data from: Diversity and population structure of northern switchgrass as revealed through exome capture sequencing
- 负责人：
- 摘要：
- , and a southern lowland ecotype composed of primarily tetraploid accessions. We employed high-coverage exome capture sequencing (~2.4 Tb) to genotype 537
Data from: Genomic prediction accuracies in space and time for height and wood density of Douglas-fir using exome capture as the genotyping platform
- 负责人：
- 摘要：
- selective breeding; especially for late expressing and low heritability traits. Here, we used: 1) exome capture as a genotyping platform for 1372 Douglas-fir
Data from: Targeted re-sequencing of five Douglas-fir provenances reveals population structure and putative target genes of positive selection
- 负责人：
- 摘要：
- ive traits. To characterize genome-wide levels of genetic diversity in coding regions and to identify genes involved in local adaptation, we used targeted sequence capture
Data from: Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga-genome of Pinus cembra
- 负责人：
- 摘要：
- e we use in-depth transcriptome sequencing to design probes for exome capture in Swiss stone pine (Pinus cembra), a conifer with an estimated genome size
Data from: Identification of a dominant chlorosis phenotype through a forward screen of the Triticum turgidum cv. Kronos TILLING population
- 负责人：
- Uauy, Cristobal
- 关键词：
- durum wheat genomics senescence chlorosis bulked-segregant analysis TILLING mapping-by-sequencing
- 摘要：
- . A segregating population was classified into discrete phenotypic groups and subjected to bulked-segregant analysis using exome capture followed by
Data from: Exome resequencing reveals signatures of demographic and adaptive processes across the genome and range of black cottonwood
- 负责人：
- 摘要：
- and adaptation to local climate. We used sequence capture to investigate the role of these neutral and adaptive processes in shaping diversity in black cottonwood
Data from: Inference of purifying and positive selection in three subspecies of chimpanzees (Pan troglodytes) from exome sequencing
- 负责人：
- 摘要：
- We study genome-wide nucleotide diversity in three subspecies of extant chimpanzees using exome capture. After strict filtering, SNVs and indels wer
