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Data from: Nucleotide polymorphism and copy number variant detection using exome capture and next generation sequencing in the polyploid grass
负责人:
关键词:
Switchgrass exome capture
摘要:
in linking genotype to phenotype, we designed an exome capture probe set based on transcript assemblies that represent ~50 Mb of annotated switchgrass exome
Data from: Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce
负责人:
关键词:
Environmental DNA;Species Interactions;Bioinfomatics\/Phyloinfomatics;Gymnosperms
摘要:
and genomic selection approaches are being developed. Targeted sequencing was achieved after capturing P. mariana exome with probes designed from the sequence
Data from: Diversity and population structure of northern switchgrass as revealed through exome capture sequencing
负责人:
关键词:
exome capture switchgrass polyploid genomics PRJNA280418
摘要:
, and a southern lowland ecotype composed of primarily tetraploid accessions. We employed high-coverage exome capture sequencing (~2.4 Tb) to genotype 537
Data from: Targeted re-sequencing of five Douglas-fir provenances reveals population structure and putative target genes of positive selection
负责人:
关键词:
Exome Capture;population structure;admixture;positive selection;Pseudotsuga menziesii
摘要:
ive traits. To characterize genome-wide levels of genetic diversity in coding regions and to identify genes involved in local adaptation, we used targeted sequence capture
Data from: Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga-genome of Pinus cembra
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;Pinus cembra;Landscape Genetics;Ecological Genetics;Adaptation;Population Genetics - Empirical;Pinus sibirica
摘要:
e we use in-depth transcriptome sequencing to design probes for exome capture in Swiss stone pine (Pinus cembra), a conifer with an estimated genome size
Data from: Identification of a dominant chlorosis phenotype through a forward screen of the Triticum turgidum cv. Kronos TILLING population
负责人:
Uauy, Cristobal
关键词:
durum wheat genomics senescence chlorosis bulked-segregant analysis TILLING mapping-by-sequencing
摘要:
. A segregating population was classified into discrete phenotypic groups and subjected to bulked-segregant analysis using exome capture followed by
Data from: Exome resequencing reveals signatures of demographic and adaptive processes across the genome and range of black cottonwood
负责人:
关键词:
Genomics\/Proteomics;climate change;Populus trichocarpa;Holocene;Ecological Genetics;Adaptation;Pleistocene
摘要:
and adaptation to local climate. We used sequence capture to investigate the role of these neutral and adaptive processes in shaping diversity in black cottonwood
Data from: Inference of purifying and positive selection in three subspecies of chimpanzees (Pan troglodytes) from exome sequencing
负责人:
关键词:
Evolution;Pan troglodytes
摘要:
We study genome-wide nucleotide diversity in three subspecies of extant chimpanzees using exome capture. After strict filtering, SNVs and indels wer

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