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Data from: Genotyping-in-Thousands by sequencing (GT-seq): a cost effective SNP genotyping method based on custom amplicon sequencing
负责人:
关键词:
conservation genetics;Population Ecology;Bioinfomatics\/Phyloinfomatics;population dynamics
摘要:
Genotyping-in-Thousands by sequencing (GT-seq) is a method that uses next-generation sequencing of multiplexed PCR products to generate genotypes
Data from: Finding the right coverage: The impact of coverage and sequence quality on SNP genotyping error rates
负责人:
关键词:
Mendelian error;Choloepus hoffmanni;genotyping error;single nucleotide polymorphism;Next Generation Sequencing;ddRAD
摘要:
Restriction-enzyme-based sequencing methods enable the genotyping of thousands of single nucleotide polymorphism (SNP) loci in non-model organisms
Data from: Fast and cost-effective genetic mapping in apple using next-generation sequencing
负责人:
关键词:
Malus x domestica
摘要:
e we use such a method, called genotyping-by-sequencing (GBS), to produce a data set for genetic mapping in an F1 population of apples (Malus x domestica
Data from: GIbPSs: a toolkit for fast and accurate analyses of genotyping-by-sequencing data without a reference genome
负责人:
关键词:
RAD;paired-end sequencing;bioinformatics;genotyping;GBS
摘要:
Genotyping-by-sequencing (GBS) and related methods are increasingly used for studies of non-model organisms from population genetic to phyloge
Data from: Special features of RAD Sequencing data: implications for genotyping
负责人:
关键词:
Genomics\/Proteomics;Caenorhabditis elegans;Population Ecology;Bioinfomatics\/Phyloinfomatics;Ecological Genetics;Heliconius melpomene
摘要:
RAD Sequencing (RAD-Seq) is an economical and efficient method for SNP discovery and genotyping. As with other sequencing-by-synthesis methods
Data from: Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce
负责人:
关键词:
Environmental DNA;Species Interactions;Bioinfomatics\/Phyloinfomatics;Gymnosperms
摘要:
ed transcriptome of Picea glauca, a distant relative. A high capture efficiency of 75.9% was reached although spruce has a complex and large genome including gene sequences
Data from: High-throughput microsatellite genotyping in ecology: improved accuracy, efficiency, standardization and success with low-quantity
负责人:
关键词:
faecal DNA;Ursus arctos;individual identification;parentage analysis;high-throughput sequencing;short tandem repeat (STR)
摘要:
to microsatellite sequences, allowing unambiguous allele identification and enabling automation of the genotyping process through bioinformatics. In addition, the massive
Data from: Extending RAD tag analysis to microbial ecology: a comparison between multi locus sequence typing (MLST) and 2b-RAD to investigate
负责人:
关键词:
Genomics\/Proteomics;Listeria monocytogenes;bacteria;Ecological Genetics;Population Genetics - Empirical
摘要:
sequencing approaches, however, such as MultiLocus Sequence Typing (mlst) are quite laborious and time-consuming, especially for large-scale analyse
Data from: Genome-wide SNPs resolve phylogenetic relationships in the North American spruce budworm (Choristoneura?fumiferana) species complex
负责人:
关键词:
genotyping-by-sequencing;population genetics;species relationships;RAD-seq;systematics;phylogenomics
摘要:
approaches have been developed to take advantage of these advances. Genotyping-by-sequencing is becoming a regular tool for gathering phyloge

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