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Data from: Improvement of the threespine stickleback genome using a Hi-C-based Proximity-Guided Assembly
负责人:
关键词:
chromosome conformation capture;de novo genome assembly;genomics and gene mapping;Gasterosteus aculeatus
摘要:
Scaffolding genomes into complete chromosome assemblies remains challenging even with the rapidly increasing sequence coverage generated by current
assemblies
负责人:
Borner, Janus
关键词:
contamination database analysis phylogeny malaria parasites
摘要:
of the sequenced host specimen. The apicomplexan sequences were extracted from the sequence assemblies using a newly developed bioinformatic pipeline (ContamFinder
Data from: Single molecule sequencing resolves the detailed structure of complex satellite DNA loci in Drosophila melanogaster
负责人:
关键词:
1.688;satellite;Evolution;drosophila melanogaster;PacBio;genome assembly;Responder
摘要:
structural rearrangements. These assemblies provide a platform for the evolutionary and functional genomics of satDNAs in pericentric heterochromatin.
Data from: Reference-free transcriptome assembly in non-model animals from next generation sequencing data
负责人:
Cahais, Vincent
关键词:
Bioinfomatics/Phyloinfomatics Transcriptomics Population Genetics - Empirical Invertebrates
摘要:
ropriate reference. Analyses showed that (i) the highest quality assemblies are obtained when 454 and Illumina data are combined, (ii) typical de novo assemblies inc
Data from: De novo sequencing, assembly, and annotation of four threespine stickleback genomes based on microfluidic partitioned DNA libraries
负责人:
关键词:
genome assembly;Holocene;threespine stickleback;Gasterosteus aculeatus;gene annotation
摘要:
the availability of additional, independently sequenced and assembled genomes. We present here the assembly of four new stickleback genomes, based on the sequencing
Data from: Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes
负责人:
关键词:
Falco cherrug;Struthio camelus;Chromosome;Avian;Genome;Melopsittacus undulatus
摘要:
The number of de novo genome sequence assemblies is increasing exponentially; however, relatively few contain one scaffold/contig per chromosome. Suc
Data from: A NGS approach to the encrusting Mediterranean sponge Crella elegans (Porifera, Demospongiae, Poecilosclerida): transcriptome sequencing
负责人:
Pérez-Porro, Alicia R.
关键词:
Crella elegans de novo assembly transcriptome characterization Mediterranean sponge life cycle stages
摘要:
assemblies. Three assemblies were based on sponge tissue of a particular life cycle stage, including non-reproductive tissue, tissue with sperm cysts

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