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Data from: Validating the power of mitochondrial metagenomics for community ecology and phylogenetics of complex assemblages
负责人:
关键词:
Diversity assessment;beta diversity;leaf beetle;Chrysomelidae;Mitometagenomics;biodiversity monitoring;Coleoptera;phylobeta;2010;species inventory;genome skimming
摘要:
bioinformatics assembly of mitochondrial genomes. Here, we tested the power of mitochondrial metagenomics by conducting Illumina sequencing on mixtures of >2600
Data from: Resolving the phylogenetic position of Darwin’s extinct ground sloth (Mylodon darwinii) using mitogenomic and nuclear exon data
负责人:
关键词:
ancient DNA;Placentalia;Mammalia;Pilosa;phylogenetics;Xenarthra;Mylodon darwinii;Cenozoic;Nuclear data;Folivora;Mitochondrial genomes
摘要:
and cold conditions prevailing within the cave. Accordingly, taxonomic assessment of our shotgun metagenomic data showed a very high percentage of endoge
Data from: Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States
负责人:
关键词:
Verrucomicrobia;metagenomics;Microbiology;bacteria;soil;Holocene
摘要:
s in the relative abundance of Verrucomicrobia, a poorly studied bacterial phylum that appears to dominate many prairie soils. Shotgun metagenomic data suggested that these
Data from: Metabarcoding and mitochondrial metagenomics of endogean arthropods to unveil the mesofauna of the soil
负责人:
关键词:
Soil biodiversity;Mesofauna;Next Generation Sequencing
摘要:
of arthropod communities from these bulk DNA extractions using cox1 metabarcoding and shotgun metagenomic sequencing on the MiSeq Illumina platform. The FBF protocol
Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
负责人:
关键词:
shotgun metagenomics soil microbial ecology 16S rRNA gene sequencing biogeography
摘要:
pool of living biomass in terrestrial ecosystems. We used metagenomic sequencing to compare the composition and functional attributes of 16
Data from: The impact of tropical forest logging and oil palm agriculture on the soil microbiome
负责人:
关键词:
Environmental DNA;metagenomics;bacteria;Agriculture;Community Ecology
摘要:
microbiome to these land-use changes are poorly understood. Using 16S rRNA gene and shotgun metagenomic sequencing, we compared composition
Data from: Lessons from genome skimming of arthropod-preserving ethanol
负责人:
关键词:
Environmental DNA;metagenomics;Preservative ethanol;insects;Coleoptera;Community Ecology;bacterial symbionts;mitochondrial metagenomics;genome skimming
摘要:
to the ethanol. In parallel, the specimens themselves were subjected to bulk DNA extraction and shotgun sequencing, followed by assembly of mitochondrial ge
Data from: Soil microbiome responses to the short-term effects of Amazonian deforestation
负责人:
关键词:
slash-and-burning;metagenomics;tropical rainforest;bacterial networks;soil microbial ecology;16S rRNA gene
摘要:
microbiome is not known. Using next generation sequencing of 16S rRNA gene and shotgun metagenomic DNA, we compared the structure and the potential functions
Data from: Detection and decay rates of prey and prey symbionts in the gut of a predator through metagenomics
负责人:
关键词:
mtDNA;coccinellid;nuclear genome;Harmonia axyridis;analyte detectability period;gut content;Cenozoic;Acyrthosiphon pisum;analyte detectability half-life;aphid
摘要:
. and Serratia symbiotica showed an unexpected temporary increase in population size by 1–2 orders of magnitude in the predator guts before declining. Metagenomics

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