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Data from: Genome sequencing and analysis of the peanut b-genome progenitor (Arachis ipaensis)
负责人:
关键词:
genome evolution genome sequence polyploidizations whole genome duplication
摘要:
. The assembled genome of A. ipaensis is ~1.39 Gb with 39,704 predicted protein-encoding genes. A gene family analysis revealed that the FAR1 family may be involved
Data from: Construction of a virtual Mycobacterium tuberculosis consensus genome and its application to data from a next generation sequencer
负责人:
关键词:
phylogenetic analysis;Mycobacterium tuberculosis;consensus sequence;virtual typing;SNP concatemer
摘要:
in concatemer-based phylogenetic analysis to determine their reliability relative to a phylogenetic tree based on whole genome alignment as the gold standard
Data from: Insights into the ecology and evolution of polyploid plants through network analysis
负责人:
关键词:
gene loss;polyploidy;gene expression;Gene Retention;Coexpression;Gossypium hirsutum;Network analysis
摘要:
or as a part of broad-scale analyses. Network analysis has been fruitful in associating genomic and other 'omic'-based changes with phenotype for many systems
Data from: Genetic basis for variation in salinity tolerance between stickleback ecotypes
负责人:
关键词:
osmoregulation;ATPase;anadromous;migratory;endocrine control;FST differentiation
摘要:
genome scan analysis and found that eight of these candidate genes were located in genomic islands of high differentiation, suggesting that they may be under
Data from: An evaluation of the hybrid speciation hypothesis for Xiphophorus clemenciae based on whole genome sequences
负责人:
Schumer, Molly
关键词:
Hybridization Introgression next-generation sequencing sexual selection incomplete lineage sorting
摘要:
in the genome of a putative hybrid species, Xiphophorus clemenciae, through whole genome sequencing of this species and its hypothesized progenitors. Based
Data from: Novel conserved genotypes correspond to antibiotic resistance phenotypes of E. coli clinical isolates
负责人:
关键词:
Genome;clinical;bacterial;SNP;antibiotic resistance;Escherichia coli;diBayes;polymorphism
摘要:
Current efforts to understand antibiotic resistance on the whole genome scale tend to focus on known genes even as high throughput sequencing
Data from: The genetic architecture of defence as resistance to and tolerance of bacterial infection in Drosophila melanogaster
负责人:
关键词:
resistance;Providencia rettgeri;Genome-wide association study;Tolerance;immunity;drosophila melanogaster;DGRP
摘要:
arms race between pathogen virulence and host resistance. Biomedically, understanding the mechanisms of tolerance and how they relate to resistance could pote
Data from: Global transcriptome changes in perennial ryegrass during early infection by pink snow mould
负责人:
关键词:
transcriptome;disease genes;Lolium perenne;RNAseq;pink snow mould;Microdochium nivale
摘要:
, was observed in the resistant genotype. The candidate genes identified in this study might be potential molecular marker resources for breeding
Data from: A study of applicability of SNP chips developed for bovine and ovine species to whole-genome analysis of reindeer Rangifer tarandus
负责人:
关键词:
whole genome analysis SNP reindeer Conservation genetics and biodiversity
摘要:
) have been trialed for whole-genome analysis of 4 female samples of Rangifer tarandus inhabiting Russia. We found out that 43.0% of bovine and 47
Data from: Chromosomal inversions and ecotypic differentiation in Anopheles gambiae: the perspective from whole-genome sequencing
负责人:
关键词:
Anopheles coluzzii;ecological divergence;Anopheles gambiae;chromosomal inversions;adaptive radiation;genome scan;population genomics;selective sweeps
摘要:
on whole genome data (including inversions) or solely on collinear regions. Nevertheless, FST outlier analysis reveals that the majority of differentiated regions

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