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Data from: Genotyping-by-sequencing for Populus population genomics: an assessment of genome sampling patterns and filtering approaches
负责人:
关键词:
genotyping-by-sequencing;data filtering;Populus tremuloides;population genomics;sampling bias;Populus trichocarpa;ApeKI
DOI:
doi:10.5061/dryad.2cs4g
摘要:
ious population-level data filtering strategies in a genotyping-by-sequencing (GBS) protocol. We focus on data from two species of Populus, because this genus ha
Data from: Development of SNP genotyping arrays in two shellfish species
负责人:
关键词:
Aquaculture Invertebrates Population Genetics - Empirical Adaptation
DOI:
doi:10.5061/dryad.jr233
摘要:
ty for detection and genotyping. Here, we present in vitro (obtained from targeted sequencing) and in silico discovery of SNPs, and the design of medium-throughput
Data from: Lineage divergence, local adaptation across a biogeographic break, and artificial transport, shape the genetic structure in the asci
负责人:
关键词:
genotyping by sequencing;Pyura chilensis;Diversifying selection;GBS
DOI:
doi:10.5061/dryad.0s87v
摘要:
the influence of local adaptation and neutral processes in a marine benthic species with low dispersal, in this study we used Genotyping by Sequencing technology
Data from: Extreme QTL mapping of germination speed in Arabidopsis thaliana
负责人:
关键词:
Life History Evolution;quantitative genetics;Ecological Genetics;Angiosperms
DOI:
doi:10.5061/dryad.kt5nq
摘要:
l regions were confirmed as QTL regions by sequencing 192 rapid germinants from an independent F3 selection experiment. Positional overlaps were found bet
Data from: Dissecting genome-wide association signals for loss-of-function phenotypes in sorghum flavonoid pigmentation traits
负责人:
关键词:
DOI:
doi:10.5061/dryad.620cq
摘要:
using high-resolution genotyping-by-sequencing (GBS) SNP markers. Studying the grain tannin trait, we find that General Linear Models (GLM) ar
Data from: Design of a 9K SNP chip for polar bears (Ursus maritimus) from RAD and transcriptome sequencing
负责人:
关键词:
Animalia;population genetics;Carnivora;Chordata;Next-generation sequencing;Ursidae;Ursus maritimus;Mammalia;polar bear;Ursus;Infinium BeadChip;single-nucleotide polymorphism;Holocene
DOI:
doi:10.5061/dryad.b35td
摘要:
associated DNA (RAD) sequencing from 38 bears across their circumpolar range, as well as blood/fat transcriptome sequencing of 10 individuals from
Data from: SNP-skimming: a fast approach to map loci generating quantitative variation in natural populations
负责人:
关键词:
Penstemon virgatus;multiplexed shotgun genotyping;Penstemon;genome-wide association;quantitative trait loci
DOI:
doi:10.5061/dryad.cp91mj7
摘要:
esent an approach to map loci within natural populations using inexpensive shallow genome sequencing. This 'SNP skimming' approach involves two steps
Data from: SNP markers tightly linked to root knot nematode resistance in grapevine (Vitis cinerea) identified by a genotyping-by-sequencing approach
负责人:
Smith, Harley
关键词:
root knot nematode genotyping-by-sequencing rootstocks marker-assisted selection single nucleotide polymorphism SNPs
DOI:
doi:10.5061/dryad.1d7n9
摘要:
in the root apical meristem. Single nucleotide polymorphisms (SNPs) were identified using genotyping-by-sequencing and results from association and genetic mapping identified
Data from: Digital fragment analysis of short tandem repeats by high-throughput amplicon sequencing
负责人:
关键词:
genotyping by sequencing;Ondatra zibethicus;marker;microsatellite;short tandem repeat;length homoplasy;sequencing
DOI:
doi:10.5061/dryad.68mc8
摘要:
High-throughput sequencing has been proposed as a method to genotype microsatellites and overcome the four main technical drawbacks
Data from: Mapping resistance to Alternaria cucumerina in Cucumis melo
负责人:
关键词:
genotyping-by-sequencing;Alternaria cucumerina;Cucumis melo;quantitative trait loci;Cantaloupe
DOI:
doi:10.5061/dryad.5404r
摘要:
. A saturated melon genetic map was constructed with markers developed through genotyping-by sequencing of an MR-1 (resistant) by Ananas Yokneum (susceptible

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